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Information about DOPE WWW

Published on December 6, 2007

Author: Estelle


DOPE:  DOPE Drug Ontology Project for Elsevier Anita de Waard Advanced Technology Group May 18, 2004 DOPE Drivers:  DOPE Drivers Business drivers in drug development: Information-hungry market Very heterogeneous data Good thesaurus (EMTREE) Connection to customers: serendipity! Semantic web: Interoperable formats (RDF/RDF-S) Data integration Using and mapping ontologies Technical Integration::  Technical Integration: GUI: Spectacle (Aidministrator) Metadata Server (Collexis) EMTREE Thesaurus (RDFS) Mediator: Sesame (Aidministrator) http requests Java Client SOAP Document Model (RDF) Source Model (RDF) SeRQL SeRQL Demo: So is it scalable, and real world? :  So is it scalable, and real world? DOPE handcrafted? Data: no; RDF: yes. But: lots of SW already out there! E.g.: OCLC, Cross-vocabulary Mappings: “This project extends the capabilities for enhancing and mapping vocabularies developed under the terminology services sub-project of the Metadata Switch. Mappings have been made for the knowledge organization resources shown in the table…” BioMOBY, An open source biological web services proposal: “The BioMOBY project [...] an open-source, simple, extensible platform to enable the discovery, representation, integration, and retrieval of biological data from widely disparate data hosts and analysis services [...] using a novel ontology-aware registry system...” [ref] and “In S-MOBY we introduce a design whereby a single, canonical structure (an OWL-DL graph) embeds everything needed for how a provider's service is described “[ref] GEON, Cyberinfrastructure for the Geosciences: “Heterogeneous source vocabularies are made compatible via the ontologies… […] our system "reasons" with the ontologies” [ref]

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