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BioSQL Reloaded: v1.0 Release, PhyloDB Module, and Future Features

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Information about BioSQL Reloaded: v1.0 Release, PhyloDB Module, and Future Features
Education

Published on July 25, 2008

Author: hlapp

Source: slideshare.net

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BioSQL Reloaded: v1.0 Release, PhyloDB Module, and Future Features Hilmar Lapp (NESCent), Richard Holland, Aaron Mackey, William Piel, Mark Schreiber BOSC 2008

What is BioSQL? Interoperable persistence layer for Bio* supporting • BioPerl • Biojava • Biopython • BioRuby

What is BioSQL? Generic & extensible relational model • sequences • features • sequence and feature annotation • a reference taxonomy • ontologies, controlled vocabularies

What is BioSQL? Generic & extensible relational model • sequences • features • sequence and feature annotation • a reference taxonomy • ontologies, controlled vocabularies • phylogenetic trees or networks

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